Scripts and data

Over the years, I have developed different scripts to support my research. I share here some of the projects I have worked with in case these tools are of interest to you.

Macroevolution

Simulations on macroevolutionary models and phylogenetic reconstructions for high-dimensional phenotypic data. These scripts were used in the publication with Simon Whelan and Chris Klingenberg in Systematic Biology (2020).

https://gitlab.com/ceferinovg/macroevolution

Drosophila suzukii ovipositor

Analyses on the ovipositor shape plasticity. These scripts were used in the publication with Antoine Fraimout, Arnaud Delapré, Vincent Debat and Raphaël Cornette in Royal Society Open Science (2020).

https://gitlab.com/ceferinovg/d_suzukii/-/tree/master/Ovipositor

Drosophila suzukii wing spot

Analyses on the wing spot size plasticity in response to developmental temperature. These scripts were used in the publication with Antoine Fraimout and Vincent Debat in Ecology & Evolution (2020).

https://gitlab.com/ceferinovg/d_suzukii/-/tree/master/Wing%20spot

Genetics of shape

Informal repository with the analyses on the genetics of shape corresponding to my collaboration with Nicolas Navarro.

https://gitlab.com/ceferinovg/genetics-of-shape

Machine learning

Educational exercises obtained from the MOOC in Coursera titled ‘Machine Learning’ (Stanford University), translated to R.

https://gitlab.com/ceferinovg/machine-learning